rs30242954 SNP Detail

Summary

• ID
  rs30242954
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:57764719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAG GTGACAGTGT ATCAGGGGCA
  W
  GTGGGCAAAA CCTCATTACT GAGAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39165261	mCV24160133	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss139591717	ENSMUSSNP982111	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30242954					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:57764719 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6542	CpG island 6542	1209 bp distal
Il17d	interleukin 17D	within coordinates
Rr404129	regulatory region 404129	1472 bp downstream
Tssr128966	transcription start site region 128966	1795 bp upstream
Tssr128967	transcription start site region 128967	1737 bp upstream
Tssr128968	transcription start site region 128968	1617 bp upstream