rs30246124 SNP Detail

Summary

• ID
  rs30246124
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60989500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCATTCCTT AGGGGGATGG
  CCTGGGTTGG CGGGAGGGGA AAACCAAGGA GCAAGCCCCC ATACCTACAA CACCTACAAC
  GAAGATCCCA TATTCATCAT ACAGCCAGGT AACCAGCACC CTTCTCTGTT CAAGCTGCTA
  GGAAGCCTAG CCTCAGAATA TCCCAAATGC AGCCTCCGCC TACTCTCTCC TGGCTCATTG
  R
  GATCAGAAGG ATGAATTGGC TTGCCATCCA GCTATGTCAA GCTACATGAA GGTAAGAATT
  TGCTTCTGAT AATTTTCACT TCTCATATCT ACTCATAAAA CTATGTTGTA GTTTTCCATC
  GATCAACATC TTAAAAGACA AAGTTCCTAT GATGGGAATT CAAGAGAGTC ACAGGAGCCA
  GGTGAACAGG TCTCTGCAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46388468	mCV24173892	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss136537169	ENSMUSSNP4915502	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss322978170	CHEV_9_60930025	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30246124					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60989500 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21877	CpG island 21877	335 bp distal
Gm34004	predicted gene, 34004	within coordinates
Rr204410	regulatory region 204410	465 bp proximal
Rr209953	regulatory region 209953	within coordinates