rs30248985 SNP Detail

Summary

• ID
  rs30248985
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62314043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAC AATTTAAAAA ATTAAACTAC
  R
  TTATTTATGT TCTGTGCATG GGAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39661983	mCV23224856	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss147265831	ENSMUSSNP5575972	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30248985					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62314043 () rs orientation: forward

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	1013 bp upstream
Cpgi10125	CpG island 10125	352 bp distal
Gm9949	predicted gene 9949	within coordinates
Rr393783	regulatory region 393783	within coordinates
Rr539065	regulatory region 539065	1949 bp distal
Rr539066	regulatory region 539066	767 bp distal
Rr539067	regulatory region 539067	147 bp distal
Tssr151487	transcription start site region 151487	790 bp downstream
Tssr151488	transcription start site region 151488	1954 bp upstream
Tssr153623	transcription start site region 153623	986 bp upstream