rs30251235 SNP Detail

Summary

• ID
  rs30251235
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:123603276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTAATGG TCTCTAGAGC
  GACTAGTGAG TGACTTTTTA GTTCCTGGGC TCCCACGGTT GCTTTATCTC TTCCCATGCT
  TTATTTTTCA CTTACAGCAT AGGGCTCGCA GAATAACCTT CACTCCATGC TGGGCTGGAA
  GCTTCAAGTT ATTTATGGAC AAGATGTGCT GCCTCTCCTT TAAAGTTTGG GGGAGGACAC
  Y
  CAAAGATTAA CAAGAGAGGA TGGATTTATC AGGCGGACTT TCTGCAAGGA AAGGGAGCTA
  AACTCATTCT GAAGCTTCTT GTCCCTCAGG TTTGCTCCCG AAGAACTCGA AGAACTCGGA
  AGAAGCAACC GACATGATGG TCCCTTGTTT TGCAAAGACT CTTGGTTTGC CTATAGTGCA
  ATCCTAGCCT ACTCCATTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45409383	mCV23882598	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss135773761	ENSMUSSNP7101061	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		C
ss320923148	CHEV_3_123512545	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30251235					SNP	C	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:123603276 () rs orientation: forward

Symbol	Name	Function Class
Rr584567	regulatory region 584567	136 bp proximal