rs30256726 SNP Detail

Summary

• ID
  rs30256726
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127795184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGATGCAG GGGGAAACTT
  CTCTGATGTT GACTGGGCAA CACATTAATG TACACGTACA GCAAAATGTC ACCAGGAGTC
  ATTTCATTGC TATATTTTGT TGTAGTTGTG GTTCCACAGA GCAGTAGTAT TTGGTTTTGC
  CTCAGGTCCC TGGATCATCT AGTCTTAGGT TCTTGGTTAC CTAAACAGTG CTAGGTATGG
  Y
  GGCATAGGCT CCATCCCATG GAGTGGGCCT TCAGTCAAAT CAGATATTGT TTGGTTATAT
  TCCCACATGC TGTGTGCTGC CATTTCTCTA GCATTCTTAT GAGGACACAA CTGTAGATCT
  GTAGGTTTTG TAGCTAGTTT AGTGTTTATC TTTTTCCTTT GGTGGTATGC AGAGTACCTT
  CACTGTAATT TATCTGAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45411524	mCV25234261	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss135877550	ENSMUSSNP4330531	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss320959100	CHEV_3_127704453	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30256726					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127795184 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	439 bp proximal
Rr584917	regulatory region 584917	526 bp proximal