rs30257118 SNP Detail

Summary

• ID
  rs30257118
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:5351166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTAAAAAA AAACCAACAG
  GGATAGTTGG CCCTGTGGTC ACTGCAGCAC TTGGGAGACT TGGGTCCCAC ACCGCATCTG
  GGGAGCACAG TAGGGCTTGC CCTGGAGGAA GGGCAGGGGT GAATCAGCCC CAAGGGTAAG
  AGTGCAGGAG AGCTGGCCCT GCCATGAGGT GACATGGGTT CACCTTTCCC TTTTCTCCCT
  Y
  AACACCTGTG GTAGTTGGGA GACCTGACCC CAAGGGCACG AGAGTAGGAG AGCCCTGTCC
  CCTCACTAAC TGTACACTCA AGGGAGCAGA CCCTGCACCT CACCTAGGCA ACACAGTGGA
  GGTGGCCCTG ATGGCAAAGG CACTGGTGAG CCAGCCCTTA GGCTATGCAA GCAGGAGAAC
  TGGTCTAGCC CCTCACAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss39662055	mCV25013871	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss325518193	CHEV_18_5351164	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30257118					SNP	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:5351166 () rs orientation: forward

Symbol	Name	Function Class
Gm50064	predicted gene, 50064	within coordinates
Gm58537	predicted gene, 58537	within coordinates