rs30257301 SNP Detail

Summary

• ID
  rs30257301
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57250086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTG GTCATCAGAT CATTGAAGTA
  K
  ATCTGTAGGT GCTACAAATC ATTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45410530	mCV22953398	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss135200337	ENSMUSSNP146950	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
ss320780337	CHEV_3_57146587	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30257301					SNP	T	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57250086 () rs orientation: forward

Symbol	Name	Function Class
Gm56807	predicted gene, 56807	within coordinates
Rr577087	regulatory region 577087	985 bp distal
Rr577088	regulatory region 577088	233 bp proximal
Rr577089	regulatory region 577089	1179 bp proximal
Tssr33320	transcription start site region 33320	1694 bp upstream