rs30259294 SNP Detail

Summary

• ID
  rs30259294
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:57761025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTT CATAAAATGC TCAGATCTGG
  R
  AACTTTTTAT TTAATCTGCA CCTAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39168073	mCV24900028	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss139591675	ENSMUSSNP2070738	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30259294					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:57761025 () rs orientation: forward

Symbol	Name	Function Class
AU020094	expressed sequence AU020094	238 bp proximal
Cpgi6542	CpG island 6542	964 bp proximal
Il17d	interleukin 17D	1209 bp upstream
Rr404129	regulatory region 404129	1922 bp upstream
Rr492824	regulatory region 492824	717 bp proximal
Rr492825	regulatory region 492825	985 bp proximal
Tssr125870	transcription start site region 125870	1166 bp upstream
Tssr125871	transcription start site region 125871	1484 bp upstream
Tssr128966	transcription start site region 128966	1888 bp downstream
Tssr128967	transcription start site region 128967	1931 bp downstream