rs30260608 SNP Detail

Summary

• ID
  rs30260608
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153513168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCCATGGC AGAGGCGTTG
  GTAGGTAATT CTGTCTATTC CCTTCATCGA TGGTTTAACT CAAACCTCAT GAGGGGCACA
  TGAAAGCCAA GGAGTTTAAG TTGTTGTGGA GACATTAACT TCACACTAGG AATGAGCTCA
  GAAAGGTTAA GTAAGTTTCC CGAACTCACA CAGCTTGTTT GGTGGTTTGA ATAAGAACGG
  Y
  CCCCATAGAA TACTTGGCTC ATAGAGAGTC GCACTTTTAG GAGGTGTAGC CTTGTTAGAG
  GAAGTGCACC ACTGGGAAGG CGGGCTTTGA GGTCTGAGGT GCTAGACCTA GTAGGTCAGT
  CTCCTGCTGC CTATGGTCAA GATATAGACT TCTCAGGTCC TTCTCCAGCA CCATGTCTGC
  CTGCAGGCTG TCACACTTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45411963	mCV24023732	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss136113447	ENSMUSSNP97062	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30260608					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153513168 () rs orientation: forward

Symbol	Name	Function Class
Rr587763	regulatory region 587763	204 bp distal
Rr587764	regulatory region 587764	962 bp distal
Rr587765	regulatory region 587765	within coordinates