rs30262269 SNP Detail

Summary

• ID
  rs30262269
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:89821336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGCTCAA TGAAAAACAA
  GAAGATATAA ATTACAGTGT ACCTGCTTAC TTCTGTGCTA TTTGGCATTT AACTATCTCT
  TATTTGTGCA TTTTTGGTGA TACTTGGAGA TGACAGTGTT TATCACATCA GGTTAGATAA
  CTCACACTCA TCATATGTTA TTTATGAATA TATAGAATTT ATATATGAAA AGCAGCTATA
  Y
  ATTTTTTGAG GCAGGATCAT ACTCTTCTGT CCACACTAAC TTCTAGTTTA TTACTGTTCT
  TGTAACTGAG CTTTCTTTTT TTTTTTCATT TTTTATTAGG TATTTAGCTC ATTTACATTT
  CCAATGCTAT ACCAAAAGTC CCCCATACCC CCCCCACTCC CCTACCCACC CACTCCCCCT
  TTTTGGCCCT GGCATTCCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss39663206	mCV23526607	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147683111	ENSMUSSNP2525259	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30262269					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:89821336 () rs orientation: forward

Symbol	Name	Function Class
Gm41800	predicted gene, 41800	within coordinates
Rr352504	regulatory region 352504	266 bp proximal