rs30262953 SNP Detail

Summary

• ID
  rs30262953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9672772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCC TACACTGGGC CTACTTGGAT
  Y
  ACAGAGCATA ACATATTAAT CTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45413396	mCV23605673	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss134576772	ENSMUSSNP762219	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		T
ss320651676	CHEV_3_9607712	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30262953					SNP	T	T	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9672772 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12974	CpG island 12974	882 bp proximal
Gm56803	predicted gene, 56803	1051 bp upstream
Rr78141	regulatory region 78141	28 bp proximal
Tssr28346	transcription start site region 28346	1091 bp upstream
Tssr28347	transcription start site region 28347	1114 bp upstream
Zfp704	zinc finger protein 704	within coordinates