rs30265233 SNP Detail

Summary

• ID
  rs30265233
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:49995594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGGGCTGG AGAGATAGCT
  CAGAGGTTGA GAACACTTCC AGAGGTCCTG AGCTCAATTC CCAGCAACCA CATGGTGGCT
  CACAACCATC TATAATGAGA TCCGATGCCC TCTTCTGGCA TGCAGGCATA CATGCAGTCC
  AAACACTGTA TACATAATAA GTAAACCTTT ATTTAAAACC CTATAACAAC CAAAGGAAAA
  Y
  GTAAGAATGC ATGAGATCAT ATTATTTTCA TCTCCATGTG CTACTATGGT AATTTAGCAA
  GATAATTGGT ACCACCAGTA GCAGGTGAAA AATGCTATGT CCAAATGGTA GCCTTTCTGG
  TCCAGCTCCC ATCATCTCTC CTAGAATCTC TTATTGTTCT ACTTAATATC ACCGTTATCT
  TCTAAGTTAT ATTTTACCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46930843	NES10941873	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30265233					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46930843	NES10941873	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:49995594 () rs orientation: forward

Symbol	Name	Function Class
Frmd7	FERM domain containing 7	within coordinates