rs30265594 SNP Detail

Summary

• ID
  rs30265594
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30172091 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTT GCTAACATTC AGCAACTGTC
  R
  CCATCAACCC CTACACATCG AATCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45911406	mCV24692141	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss133095156	ENSMUSSNP4265801	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss321776215	CHEV_6_30122092	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30265594					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30172091 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17248	CpG island 17248	824 bp proximal
Mirc35hg	microRNA cluster 35, host gene	within coordinates
Rncr4	retina expressed non-coding RNA 4	801 bp upstream
Rr146072	regulatory region 146072	1690 bp distal
Rr146073	regulatory region 146073	90 bp distal
Rr146074	regulatory region 146074	109 bp proximal
Tssr55327	transcription start site region 55327	768 bp upstream
Tssr60107	transcription start site region 60107	1984 bp downstream