rs30266128 SNP Detail

Summary

• ID
  rs30266128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:49995899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGTAGCCT TTCTGGTCCA
  GCTCCCATCA TCTCTCCTAG AATCTCTTAT TGTTCTACTT AATATCACCG TTATCTTCTA
  AGTTATATTT TACCAATACC TAATTCAGAT TTTGTTCACA TATTTAAAAT AGAAGCCAAG
  AATCCCTTTC TATGGCGGTG CTTCTGATGG TTAAAAATAA AATTCTCTTT CTTTCATACC
  Y
  TAGTCTTCTG TCTCTATGGC TCCCCATCAC ATTTAGAGTA ATGTTCTAGG TCTTGAATGT
  GCATTTAACT CCCCCCTCCC TTCTCACTAA GGCTTCAGAC AGCCACAAAG GCTTCTTGAT
  GTTTCTCAAA CCCCCAGGCA TGTTCTTTCT CTCCTCTGGC CTTTTCCACT GACTATTCCA
  GGTGTGTGGA CCTCTCTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46930849	NES10941875	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30266128					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46930849	NES10941875	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:49995899 () rs orientation: forward

Symbol	Name	Function Class
Frmd7	FERM domain containing 7	within coordinates
Rr4163	regulatory region 4163	299 bp distal