rs30266234 SNP Detail

Summary

• ID
  rs30266234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83144264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTT CAGGGGCAAG ATCTTAGCTG
  R
  CAGGCACATT TTGCTACCTG CTATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45913010	mCV23932958	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss133346824	ENSMUSSNP5089550	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321844003	CHEV_6_83117276	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30266234					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83144264 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17595	CpG island 17595	853 bp distal
Dctn1	dynactin 1	within coordinates
Gm15624	predicted gene 15624	within coordinates
Rr399719	regulatory region 399719	1452 bp downstream
Rr632791	regulatory region 632791	1321 bp distal
Rr632792	regulatory region 632792	1624 bp distal
Rr632793	regulatory region 632793	565 bp distal
Tssr57316	transcription start site region 57316	1305 bp downstream