rs30266276 SNP Detail

Summary

• ID
  rs30266276
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47124422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTT TCGTCCTTGT TTTTGCTGTG
  Y
  GGCAGAGCTA TTGAGGGAGC TGAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39168742	mCV24168685	ABI	CRAMUS_MOUSE	f	SNP		T	T					C
ss49175173	NES12485141	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	C	T		T	T	T	C		C	T	T	T		T
ss139393621	ENSMUSSNP2950870	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss324592443	CHEV_14_47506640	CHEVERUD	SCREENING_POP	f	SNP													T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30266276					SNP	T	T	T	T	T	C	T	C	T	T	T	C	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49175173	NES12485141	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47124422 () rs orientation: forward

Symbol	Name	Function Class
2810457G06Rik	RIKEN cDNA 2810457G06 gene	1901 bp upstream
Cpgi6376	CpG island 6376	1814 bp distal
Rr297079	regulatory region 297079	421 bp distal
Samd4	sterile alpha motif domain containing 4	within coordinates
Tssr128301	transcription start site region 128301	1936 bp upstream