rs30267577 SNP Detail

Summary

• ID
  rs30267577
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:125395323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAC TTGGGAGGCA GAGGCAGGCG
  R
  ATTTCTGAGT TCGAGGCCAG CCTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45911431	mCV24919587	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss133615403	ENSMUSSNP3127288	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss321939040	CHEV_6_125368378	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30267577					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:125395323 () rs orientation: forward

Symbol	Name	Function Class
D6Jpk2	DNA segment, Chr 6, Japan, Kominami 2	228 bp distal
Gm66368	predicted gene, 66368	within coordinates
Gm66372	predicted gene, 66372	1269 bp downstream
Rr638702	regulatory region 638702	451 bp distal
Rr638703	regulatory region 638703	284 bp proximal
Rr638704	regulatory region 638704	549 bp proximal
Rr638705	regulatory region 638705	999 bp proximal