rs30271861 SNP Detail

Summary

• ID
  rs30271861
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61292062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGATAGT GTGTACCTAT
  AATCCCAGTG CTTAAGAGGC AGAAGCAAGA GAATAAAGAG TTTAAGGATG GGCTGGAGAG
  ATGGCTCAGT GGTTAAGAGA ACTGACTGCT CTTCCAGAGG TCCTGAGTTC AAGTCCCAGC
  AACCACATGA TGGCTCACAA CCATCTGTAA TGGAATCTGA TGTACTCCTC TAGTATGTAT
  Y
  TGAAGACAAC TACAGTGTAC TCAATATAAA TAAAAATAAA TCTATAGAGT TTAAGGTTAT
  CTTCAGTTCT GTGGTGAGTT TGAGGCCAGC TTGGGTTACC TGAGCCCCCT CTCTCAAAAA
  ACTAACAAAC AAAGAAAACA AAGGTTTTGG AGGTTCCCCA CACCCCAGTG GCATGTATTG
  GGTCACTCGA AGGTCCACCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39168809	mCV23119937	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss324650912	CHEV_14_61673450	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30271861					SNP	C	C	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61292062 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6575	CpG island 6575	1882 bp proximal
Rr295812	regulatory region 295812	1974 bp distal
Rr369842	regulatory region 369842	1970 bp upstream