rs30275400 SNP Detail

Summary

• ID
  rs30275400
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115094445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAT TTATTTTATG TGCATTGGTG
  Y
  TTTGTCTGCA TGTATGTTTG TGTGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46391601	mCV23360615	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss137005371	ENSMUSSNP1475398	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss323205126	CHEV_9_115174495	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30275400					SNP	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115094445 () rs orientation: forward

Symbol	Name	Function Class
Rr193052	regulatory region 193052	1645 bp distal
Rr193053	regulatory region 193053	1356 bp proximal
Stt3b	STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	within coordinates