rs30275673 SNP Detail

Summary

• ID
  rs30275673
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:41442225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAA AGCCACAAAC TTCTTGAAGA
  S
  GAACGTCATA GTTCAGTGTA ATGAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46390215	mCV24305844	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss136357118	ENSMUSSNP212304	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss322926770	CHEV_9_41339012	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30275673					SNP	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:41442225 () rs orientation: forward

Symbol	Name	Function Class
Gm48742	predicted gene, 48742	within coordinates
Mir100	microRNA 100	496 bp upstream
Mir100hg	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene	within coordinates
Rr677056	regulatory region 677056	1426 bp proximal
Rr677057	regulatory region 677057	1927 bp proximal
Tssr84510	transcription start site region 84510	563 bp upstream
Tssr84511	transcription start site region 84511	1069 bp upstream