rs30277709 SNP Detail

Summary

• ID
  rs30277709
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121709160 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTTCCTGC TGGGCCTCCA CCCAATGCCA TTTAAAACAG
  TGTGTCACAT CCAAATGGGA GCAGAGGATG TGGCGTGGCT GAGTTTCAGA AGCCCTGTGT
  K
  TGTGCTTTAT TATTATTTTC GAAGGTTTTT TTTTTAATGC TGTATTTGTT TTGTTTCCAT
  CAACTTAGTG TTATGAGTTG GGTTTCATGA GATTAAATAT                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46932060	NES10679210	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs30277709					SNP	T	T	T	T	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46932060	NES10679210	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121709160 () rs orientation: forward

Symbol	Name	Function Class
Gm34119	predicted gene, 34119	within coordinates
Rr584204	regulatory region 584204	within coordinates
Rr584205	regulatory region 584205	1322 bp proximal