rs30280503 SNP Detail

Summary

• ID
  rs30280503
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121744221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCG CGACGGATCT GGTACTCTTG
  Y
  CCGCTGGCCA TCTTCAGGAC ATAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
ss46391465	mCV23340112	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss61238804	NES16858686	PERLEGEN	MM_PANEL2	f	SNP	T				C	T		T	C
ss323232578	CHEV_9_121824273	CHEVERUD	SCREENING_POP	f	SNP							C			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
rs30280503					SNP	T	T	C	T	C	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61238804	NES16858686	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121744221 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	within coordinates
Tssr92081	transcription start site region 92081	454 bp upstream
Tssr92082	transcription start site region 92082	291 bp upstream
Tssr92083	transcription start site region 92083	20 bp downstream
Tssr92084	transcription start site region 92084	1133 bp downstream