rs30281222 SNP Detail

Summary

• ID
  rs30281222
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:124934589 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCA CACTGCACTG GGCTGTGAGG
  R
  ACAGGTATCA ACAGTCCCCC TCTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45913567	mCV24685733	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss133612386	ENSMUSSNP898366	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321938147	CHEV_6_124907644	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30281222					SNP	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:124934589 () rs orientation: forward

Symbol	Name	Function Class
Cops7a	COP9 signalosome subunit 7A	787 bp downstream
Rr380054	regulatory region 380054	540 bp downstream
Tssr63233	transcription start site region 63233	1838 bp downstream