rs30282546 SNP Detail

Summary

• ID
  rs30282546
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50619342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTATAGT CTTCATTCCC
  TTGAGACAGA TTTGGGGGTC TTGTTTACTT GGACTAGGGT GGCAGTCAGC GAGCACAGCG
  ATCCTCTGCC TCCACCCCCA CGTGCTGGAG TTATAGGTAC TCTTGTGACC ATGCATGGCT
  GTATAAACAT GAGTCCATGG TGATGTCTAA ACCTCATGCT TACACATGAA CCATAACTGA
  M
  CGGTCTCCTC AGCCCTGTTG CAGTTATTTC AGGCTGGTTA AAAACCTGGA ACTTGGGAAA
  ATAAAAACAC ATACTGACAC TGCTTCCATG TTCATGGAAT ACCTCTGGAA ATAACGGAAA
  TAACCCTGGC TGCCAGGATG GAGGATGGGT AACTGTGGTG GCTAACATTG ATTATCTATC
  AATGTGACAG GATATAGAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46390781	mCV25205308	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss136479790	ENSMUSSNP2068421	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30282546					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50619342 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates
Gm51674	predicted gene, 51674	1372 bp downstream