rs30284266 SNP Detail

Summary

• ID
  rs30284266
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45976210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAAGATG GAGTAAATGT
  GTGTGTGTCT GCCTTGCGTG TGGGGTAAAC CAGCTTTGGA GAAGGCCTTT TTTACATATC
  ACACACCTTC TGTACTTACT CTTCTTAAGA AGGTAGTAGG GCAGCCGGTG GAATCAACTG
  TCAGTAAATC TTAGTGTGAG TTGTTGAAAT TTCTAAGAAA CATTCCCTAT TCCAGGCAAA
  M
  CTCTGGAGAG TGAATGACAA AGTATTCTAG AGGAAGCAGG TTCTGACACT GCAAGTGAGT
  AGGCCAAAGG CCCCGGCCAT AGTTCTCAGA GGTCTTTTTT AAAAAAGTAG ACATTGGACA
  AATATGTTGT CCAATGATAT CTTACAGAGA CTTTTAGCAG GCTTTTGATT TATAGAGTTA
  AATATTTTAT TGACTTTTAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46393198	mCV25176525	ABI	CRAMUS_MOUSE	f	SNP		C	A					A	A
ss47695610	NES11315781	PERLEGEN	MM_PANEL2	f	SNP	C		A	A	A	A	A		A	A	C	C	A	A	A	A
ss136422434	ENSMUSSNP4770187	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30284266					SNP	C	C	A	A	A	A	A	A	A	A	C	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47695610	NES11315781	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45976210 () rs orientation: forward

Symbol	Name	Function Class
Gm46110	predicted gene, 46110	within coordinates
Rr209232	regulatory region 209232	1592 bp proximal
Sik3	SIK family kinase 3	within coordinates