rs30285374 SNP Detail

Summary

• ID
  rs30285374
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:107748299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAATA ACCTTCCCCT AGCTAGGAAT
  R
  ACAGCTGCCA ATTGTAGTGC CTAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46393027	mCV23594868	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30285374					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:107748299 () rs orientation: forward

Symbol	Name	Function Class
4930506F14Rik	RIKEN cDNA 4930506F14 gene	1388 bp upstream
Cpgi22310	CpG island 22310	990 bp proximal
Rbm6	RNA binding motif protein 6	within coordinates
Rr401668	regulatory region 401668	1591 bp upstream
Rr686633	regulatory region 686633	983 bp proximal
Rr686634	regulatory region 686634	1399 bp proximal
Rr686635	regulatory region 686635	1711 bp proximal
Tssr87026	transcription start site region 87026	1860 bp upstream
Tssr91474	transcription start site region 91474	1303 bp downstream
Tssr91475	transcription start site region 91475	1587 bp downstream
Tssr91476	transcription start site region 91476	1648 bp downstream
Tssr91477	transcription start site region 91477	1683 bp downstream
Tssr91478	transcription start site region 91478	1725 bp downstream