rs30285769 SNP Detail

Summary

• ID
  rs30285769
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:88761999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCT GATTTAGAGA AATAAAAAGT
  Y
  GGTATCAGTT ATCTGTCATT GAACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss46436491	mCV22277699	ABI	CRAMUS_MOUSE	f	SNP	T	C	C		T		C
ss47931755	NES12025367	PERLEGEN	MM_PANEL2	f	SNP				T		C	C	T		C	C		T
ss147243249	ENSMUSSNP1222538	ENSEMBL	ENSEMBL_Sanger	f	SNP							C
ss323380557	CHEV_10_88388882	CHEVERUD	SCREENING_POP	f	SNP									C			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs30285769					SNP	T	C	C	T	T	C	C	T	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47931755	NES12025367	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:88761999 () rs orientation: forward

Symbol	Name	Function Class
Gm66637	predicted gene, 66637	1758 bp downstream
Slc5a8	solute carrier family 5 (iodide transporter), member 8	within coordinates