rs30285771 SNP Detail

Summary

• ID
  rs30285771
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:88762096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAATGCAT ATCGTATACC
  ACGCTAGCTT CTGCTGCCTT GTGTATGTTT GCATTTCACT CTCCCTTAGT GGATTACCAA
  GCTGATTTAG AGAAATAAAA AGTTGGTATC AGTTATCTGT CATTGAACAA ATAATGATTT
  TTAAAAAAAA TTTCCATGTT ACCCTTTATC TTTCAGAGGA ATCATGTTTT AAACTATAAA
  Y
  TGCATCCTGT GGAAGTTGGT GGAACTGATA ACCCTGCCTT CAACCATGTT GAGCTGAACT
  TCACAGATCA CAGTGGCAAG ATCAATGGGA CTCGCTTGTG AAGCATCTCC AGGGCTAGAT
  GACATTGTAT AATGTCTGTT TTGTTTTTGT TTTGCTTTTC TTTAAACATG TTTTAGGATA
  GTTGGATCAG ATCAGTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47931757	NES12025368	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs30285771					SNP	T	T	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47931757	NES12025368	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:88762096 () rs orientation: forward

Symbol	Name	Function Class
Gm66637	predicted gene, 66637	1661 bp downstream
Slc5a8	solute carrier family 5 (iodide transporter), member 8	within coordinates