rs30287769 SNP Detail

Summary

• ID
  rs30287769
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:88764107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAA CTTTTAAAAC ATGGGACTAA
  W
  ATAAATATGA GGGATATGTC AGCAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	SM/J	WSB/EiJ
ss47931775	NES12025264	PERLEGEN	MM_PANEL2	f	SNP		T	T	A			T
ss147243344	ENSMUSSNP1128792	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss323380578	CHEV_10_88390990	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	SM/J	WSB/EiJ
rs30287769					SNP	A	T	T	A	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47931775	NES12025264	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:88764107 () rs orientation: forward

Symbol	Name	Function Class
Gm66637	predicted gene, 66637	within coordinates
Slc5a8	solute carrier family 5 (iodide transporter), member 8	within coordinates