rs30303579 SNP Detail

Summary

• ID
  rs30303579
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:14464101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAC CCTGGGCACA TTACCTACCC
  Y
  CTGAGCTTCA GCTTTTAGTA ACTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss39172826	mCV23786414	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss138985328	ENSMUSSNP6662365	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs30303579					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14464101 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Abhd6	abhydrolase domain containing 6			Intron
				mRNA-UTR
Gm30244	predicted gene, 30244			1618 bp upstream
Rr487897	regulatory region 487897			1488 bp distal
Rr487898	regulatory region 487898			300 bp distal
Rr487899	regulatory region 487899			1382 bp proximal
Rr487900	regulatory region 487900			1619 bp proximal
Tssr124225	transcription start site region 124225			860 bp upstream
Tssr124226	transcription start site region 124226			918 bp upstream
Tssr127395	transcription start site region 127395			1627 bp upstream
Tssr127396	transcription start site region 127396			1615 bp upstream