rs30303966 SNP Detail

Summary

• ID
  rs30303966
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86341515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAA GCCCAGCCAT GGAGGAACAC
  R
  GCTTTTCTCA AAGGACAATG GGTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45914221	mCV23940921	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss133356562	ENSMUSSNP4619545	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321846304	CHEV_6_86314527	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30303966					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86341515 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17660	CpG island 17660	608 bp proximal
Fam136a	family with sequence similarity 136, member A	1113 bp upstream
Gm56967	predicted gene, 56967	within coordinates
Rr137087	regulatory region 137087	within coordinates
Rr146577	regulatory region 146577	within coordinates
Rr368110	regulatory region 368110	753 bp upstream
Tssr57460	transcription start site region 57460	1107 bp upstream
Tssr57461	transcription start site region 57461	1140 bp upstream
Tssr61788	transcription start site region 61788	1007 bp downstream