rs30310751 SNP Detail

Summary

• ID
  rs30310751
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:94390429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTATTGATA TGCTATTTTT GTGCTGGAAG CCTGTGCAGG GCGGGTATCA CATCATTTCT
  CTCCCAAGTT CTCGGTCTCT GAGAGAACAG CAACTTGCCA GAGACTTGTT GGATAGGGCA
  AAGTGCCAAT CTAAGATTGC CCCATGCTGT GGCCCTGGTT CTGACTCATT CTATCTTGAG
  GGATGGGTGT GGCTAGCTGT GCTGGTGCCT GGGAGGGAAG TTCCTGTTTT GGCTTCAGTA
  CAGAAGAGAT GAATGGCCAT AAGTTTCTAG CCTATAGACC TCCCCTGGTG CGTCGCGCGC
  R
  CACACACACA CACACACACA CACACACACA CACACACACA CACTTTAGGA GATTGAATTT
  CAGATAGGAT AATCCCAGAT TGGTAGAAGG TAAAGCTGGG GGCAGATTGG CAGGAGGATT
  TATGTGCCGG TGACCTCCCA CCCCCCACCA GCTGCTCTCA GATGCAGAGA TTTGGGGGGA
  AGGAAGGCTG AGCAGGAACA TCATTGGAGA TGAGTCTCAG GTTTGATCCA AGGCTGTGAA
  CACCTGGCTG GCAGAGTCCA GCCAGGAGCT GTATTTATTT CTCCATGTTA GCGGATGTCA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45417224	mCV22282224	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30310751					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94390429 () rs orientation: forward

Symbol	Name	Function Class
Celf3	CUGBP, Elav-like family member 3	within coordinates
Cpgi13484	CpG island 13484	822 bp proximal
D3Umi4	DNA segment, Chr 3, University of Michigan 4	1952 bp proximal
Gm65215	predicted gene, 65215	218 bp downstream
Gm65218	predicted gene, 65218	1308 bp downstream
Rr580638	regulatory region 580638	7 bp distal
Rr580639	regulatory region 580639	186 bp proximal
Rr580640	regulatory region 580640	1087 bp proximal
Rr580641	regulatory region 580641	1840 bp proximal
Tssr30454	transcription start site region 30454	1202 bp upstream
Tssr30455	transcription start site region 30455	1216 bp upstream
Tssr30456	transcription start site region 30456	1247 bp upstream
Tssr34391	transcription start site region 34391	1093 bp downstream