rs30311435 SNP Detail

Summary

• ID
  rs30311435
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117484967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCA TCCCATAATC AGCCTCCAAA
  Y
  GCTGACACCA TTGCATACAC CAGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45418198	mCV23041201	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss135694153	ENSMUSSNP5646126	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30311435					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117484967 () rs orientation: forward

Symbol	Name	Function Class
Plppr5	phospholipid phosphatase related 5	1810 bp downstream
Rr583855	regulatory region 583855	1681 bp proximal