rs30311886 SNP Detail

Summary

• ID
  rs30311886
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115434668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCCCGCT CCAAACACAC
  ACACACACAC ACTAAAAGTA ACTCTCAGAC AAGCCCAGGT ACCTGGAAAA AAGCAGAAAT
  AAGACTAGCA GACTCAGAGA TCAGCCAAAC TAGAAGAAAC AAAAAAACAG CTGAGCTTCC
  TTAAGAGGCT TAGATCACCT GAAAAGGGGA CTCCCTCACC TGGTGAGCTA GTGTCCTGCA
  R
  CTTCCCAGAA CTGGCTCCCA CCCTGAGATG GAGTTTTGTG ATGCAGCTTT CTTTGAGTGG
  TTTCTTTCTG TAACTGCTCA CCATACTCCT GCAAGTAACA CCAATAAAAA AGCCATTGGT
  TCACCAAACT TTGATGTGTT GTTCATTCCC TGTCTGGGTT ATATAGATAT TCAGATCTCT
  ACCAATAAAA TAAATAAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45417333	mCV24998061	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss135663605	ENSMUSSNP6933680	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30311886					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115434668 () rs orientation: forward

Symbol	Name	Function Class
Gm40124	predicted gene, 40124	within coordinates
Rr367536	regulatory region 367536	1310 bp upstream
Rr367537	regulatory region 367537	1709 bp upstream
Rr583561	regulatory region 583561	279 bp proximal
Rr583562	regulatory region 583562	521 bp proximal
Rr583563	regulatory region 583563	1862 bp proximal
Tssr35264	transcription start site region 35264	491 bp downstream
Tssr35265	transcription start site region 35265	524 bp downstream