rs30312054 SNP Detail

Summary

• ID
  rs30312054
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:15338926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCCACCAA ATCCAGACAC TATTGCATAT GCCAGCAAGA
  TTTTGCTGAA GGGACCCTGG TATAGCTGTC TCATATGGCT ATGCCAGTGT CTGGCAAATA
  S
  AGAAGTGGAT GCTCACAGTC ATCTATAAGA TGAAACACAG GGCCCCCAGT GGAGAAGCTA
  GAGAAAGCAC CCAAGGAGCT GAAGGTGTTT GCAACTCTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39668761	mCV24411942	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	C
ss325722972	CHEV_19_15436052	CHEVERUD	SCREENING_POP	f	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30312054					SNP	G	G	C	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:15338926 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10647	CpG island 10647	787 bp proximal
Pomc-ps1	pro-opiomelanocortin, pseudogene 1	773 bp upstream