rs30312444 SNP Detail

Summary

• ID
  rs30312444
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:139506699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAT TAAGGACACT TAATCAAAAG
  Y
  AATCTATAAC ATATTACAGG TTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45416776	mCV23599237	ABI	CRAMUS_MOUSE	f	SNP	C		T	C
ss135971152	ENSMUSSNP4298995	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320985490	CHEV_3_139463902	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30312444					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:139506699 () rs orientation: forward

Symbol	Name	Function Class
Rr586267	regulatory region 586267	1579 bp distal
Rr586268	regulatory region 586268	1925 bp proximal