rs30313548 SNP Detail

Summary

• ID
  rs30313548
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82936634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGG TTTTGTGTCT CAAAATGGAT
  Y
  ATACAGGGAA AAATTTTTTT ATATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45917489	mCV23178311	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss133345776	ENSMUSSNP3852092	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30313548					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82936634 () rs orientation: forward

Symbol	Name	Function Class
Gm67812	predicted gene, 67812	550 bp upstream
M1ap	meiosis 1 associated protein	within coordinates
Rr379683	regulatory region 379683	1157 bp downstream
Tssr57263	transcription start site region 57263	556 bp upstream
Tssr57264	transcription start site region 57264	588 bp upstream
Tssr57265	transcription start site region 57265	616 bp upstream
Tssr57266	transcription start site region 57266	887 bp upstream