rs30316762 SNP Detail

Summary

• ID
  rs30316762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:39302691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA AAAAAACTTA GGCCATTTTT
  Y
  AATTTCTCCC TTGAAATCTC CATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39668819	mCV24532892	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss146374610	ENSMUSSNP4759537	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss325804090	CHEV_19_39388737	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30316762					SNP	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:39302691 () rs orientation: forward

Symbol	Name	Function Class
Cyp2c29	cytochrome P450, family 2, subfamily c, polypeptide 29	within coordinates
Tssr156337	transcription start site region 156337	1233 bp upstream
Tssr156338	transcription start site region 156338	1267 bp upstream
Tssr156339	transcription start site region 156339	1292 bp upstream
Tssr156340	transcription start site region 156340	1392 bp upstream
Tssr156341	transcription start site region 156341	1441 bp upstream