rs30316952 SNP Detail

Summary

• ID
  rs30316952
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:94445425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAATA ATACAAAGGA TGGAGGTATG
  R
  CAAATACTCA TAAAATAAAA TATTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45417879	mCV23091861	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss135505882	ENSMUSSNP5496037	ENSEMBL	ENSEMBL_Sanger	f	SNP				A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30316952					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94445425 () rs orientation: forward

Symbol	Name	Function Class
Gm43774	predicted gene 43774	630 bp upstream
Rr375397	regulatory region 375397	664 bp downstream
Snx27	sorting nexin family member 27	Intron