rs30318104 SNP Detail

Summary

• ID
  rs30318104
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115832638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAATCTAT ATATTAGGTT
  TCAGACCAGC TAGGACACAT GGTGAGACCC GACTTTAAAA AAATAAAAAG ATAAATCAGA
  TACTTATAGA CTAAGAGACT GAAGGGACCA CATATATTAA TACAAATATA AAATATACAT
  ATATTTCAAA GTGTACATTT AAAAAGTTAC AGACAGCAAA TGCAAAAACT GTCAGGTGGG
  K
  TTTTTTTTTA GAACTAAAGT ATATTTGCAC AACAAAGAAA GAGATCCCTT TTACCATTTT
  GTTTAGACAG GCAAACTATC TGATCGGCAT AAGAAGATAG CTAGTGAAGA GTAAGTGTAT
  GAAAAAACTC TAAGCACCAC TAAGAGATCA AAGCTACAGT GAGATATCCT CTCACTCCTG
  TTAAAATAGT GAGTGACTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45417784	mCV23906243	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G	G
ss135668192	ENSMUSSNP212984	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30318104					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115832638 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	1975 bp proximal