rs30318327 SNP Detail

Summary

• ID
  rs30318327
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21575725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACTCCCTC TGCAATTGAC
  TTGGTGTTGT CAGGCCTGAG TGTCTCCATC CTCGCCATCC GAGTCAGACT CAGCGTCTAA
  GTCCTCATCA CTGTCTTCCT TCCGTCCGCA GCGTCTTCTA TGGCCAGAAC CTTCATTTTC
  AGTGTTTTCT GGAGCGTCTG GTTCTTTATT AAACCTAAAT GGAAGAAAAG GAAGACAAGG
  Y
  GAAAACGAAT TCCCAGGCTT CCTTTATCTA AAAGCGATAA AGCCTTTACA AGTCTACTAT
  TGGAGTCTCC AGAGAGAACA GAGCTCTCCT ACGGACTAGC TTAAACCTGG AGTCAGCAGA
  TTCTAACTGC TGTCAGAAGA ATGGGCCCAA GGAGTCAGGA AAGAAGCCCT TCAGGGAGGA
  TTGCTGTGAA GTGGGTGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39669185	mCV24451895	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss146182937	ENSMUSSNP3391494	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss325752846	CHEV_19_21672851	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30318327					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21575725 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	within coordinates
Gm59243	predicted gene, 59243	within coordinates
Rr356955	regulatory region 356955	676 bp proximal
Rr364167	regulatory region 364167	within coordinates