rs30319958 SNP Detail

Summary

• ID
  rs30319958
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70347533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGGTGTAA ACTTACGTGT
  CTGTGGATAT AGGATCTTCA CACACTTAAA GTATGATGCA TCTCTAATGA TATTAAATAT
  ATATTTATAG GGCTTTAGTG TGGAGGGAGG ACACAGCAGA TGATTCATCT TGAATAATAA
  AACAAAAATA GCTCTAAATA TTACCTGGAA AGTCATGCAA GAAAAGGGAT TAATTTTACT
  S
  GATGTTAAAG TTTTTACTTA TTTGTGAAAC AGTAGGAATA TTTAACACCA ATATATGATT
  TTTCTCAAAG ATATTTTTTA AGTCATGCCT GGTGGTGCAT GCCTGTAATT TCAGCACTTA
  CAAGGCTGAG GCAAGAGGAT TGCTGTGAAT TTAATGTCAG CTTGTATTAT AGAATGAGTT
  ACAGGCTAAT GAAAGCCACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39173705	mCV24339248	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	G
ss139680833	ENSMUSSNP4441509	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30319958					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70347533 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494843	regulatory region 494843			381 bp distal
Rr494844	regulatory region 494844			887 bp proximal
Rr494845	regulatory region 494845			981 bp proximal