rs30320194 SNP Detail

Summary

• ID
  rs30320194
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:95159351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATCTTATT AAAGACAGGC
  AAGATGAATG TACGTCTACA GATGTGTGTG TGTACACACG TACTCTGCTC CCTAGATGGA
  CACGCGAAAT TCTTGCTTCC GCTAGTTCTA ACATTCACAG CTGTCTACAG CCAAAGCTTG
  GTAGCATTAA AATCATAGGG CGATGAGTGG CAAAATGTTA GACGTGAGGA AGCCAAGACC
  S
  GGGTAGGAAA GCCCTCTCTC CAGTGCCCAT CACCATCACT GAACAGCCTT AAAAGCAGAG
  GCCAGAGGAG GAGAGTGAGG AGGGCTGAGC GGGTGACCTG GTGACCAAGT TAGGAAAACC
  AGAGTGTTCC CAGTCCTTGC TGCTGGCACA GTTCACAATG AAAATAGCTT TATATAAAAA
  GATAGCATTA CAGCATGAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49123101	NES12476720	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs30320194					SNP	G	G	G	G	G	G	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49123101	NES12476720	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:95159351 () rs orientation: forward

Symbol	Name	Function Class
Gm48420	predicted gene, 48420	1458 bp upstream
Pde8b	phosphodiesterase 8B	1611 bp downstream
Tssr120710	transcription start site region 120710	980 bp downstream
Wdr41	WD repeat domain 41	within coordinates