rs30322690 SNP Detail

Summary

• ID
  rs30322690
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86976013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCT GTCTACATAA CAAGTTCCAG
  K
  CCAGCCAGTG AGTGAAACCC TGTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45918901	mCV22631025	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T	G
ss133361191	ENSMUSSNP3079050	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G		G
ss321848054	CHEV_6_86949025	CHEVERUD	SCREENING_POP	f	SNP						G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs30322690					SNP	G	G	G	T	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86976013 () rs orientation: forward

Symbol	Name	Function Class
Aak1	AP2 associated kinase 1	mRNA-UTR
Rr633570	regulatory region 633570	1792 bp distal