rs30323178 SNP Detail

Summary

• ID
  rs30323178
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32386739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTAAATCCA GTAGACATTT TAATCTAGAG ACTGTACCAC
  TTGCTCACAA AGGGTGCTAA AGGACGTCCC CTCCTCAAGG CATCACCCCT TCCCACCTGC
  Y
  TGTCGCCACT AACTGCATCC CCTTTCAAAG GTCCAGACTC AGCAGCATCC AGTCCCCACC
  TCTCAATGTT TATTAAGTCC GAGCTCTTGT AGCCATCCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46395689	mCV25017581	ABI	CRAMUS_MOUSE	f	SNP		T	T					T	C
ss61365482	NES16749235	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	C	T		C	T	C	C	T	T	C	T
ss136246218	ENSMUSSNP618646	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30323178					SNP	T	T	T	T	T	C	T	T	C	T	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61365482	NES16749235	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32386739 () rs orientation: forward

Symbol	Name	Function Class
Fli1	Friend leukemia integration 1	within coordinates
Gm38292	predicted gene, 38292	1890 bp downstream