rs30325248 SNP Detail

Summary

• ID
  rs30325248
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48940061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGACCCACA GCACCTTGTA TACCAGGGGT GGCTGTGCAT
  GCTTGCAGTC TTAGCATTCA GGCACAGGTG GCAGAATCAG ATGTTCAAGG CCAGCCCAGG
  Y
  TACTTAAGAC CCTGACTGAA AAGAAGCAAA TAGACTCTTA CTGCTTCACG AAAAGGCGGC
  GGCCAACAAG GGCTTTGTTG TTTTGTTGCA GATTCTTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
ss46395411	mCV22641019	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss136466281	ENSMUSSNP3467854	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
rs30325248					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48940061 () rs orientation: forward

Symbol	Name	Function Class
1700042D02Rik	RIKEN cDNA 1700042D02 gene	within coordinates
Tssr85003	transcription start site region 85003	621 bp downstream
Usp28	ubiquitin specific peptidase 28	within coordinates