rs30328477 SNP Detail

Summary

• ID
  rs30328477
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50619510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACATACTGA CACTGCTTCC ATGTTCATGG AATACCTCTG
  GAAATAACGG AAATAACCCT GGCTGCCAGG ATGGAGGATG GGTAACTGTG GTGGCTAACA
  Y
  TGATTATCTA TCAATGTGAC AGGATATAGA AAATCACGTA GGAGACAAGT CTCTCCGCTG
  AGGAACTATT TACATTAGGT TGGCCTCTCT GGCCACGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46394872	mCV25205319	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss136479796	ENSMUSSNP6253695	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss322959762	CHEV_9_50516315	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30328477					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50619510 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates
Gm51674	predicted gene, 51674	1540 bp downstream