rs30329832 SNP Detail

Summary

• ID
  rs30329832
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70872566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGACCAAA CCTGAAGTCT
  GTGTGAAGTC TGTGGCGGTG GTTGTAGGGT TTGACTCCTG GAACAAACAA GCTTGTGACA
  ATTTTGGAAA CAATATTGAG TTCTGGGAGA TGACACTATC TATAAATAAC AATGATATCA
  ACTTGGCTAA CAGCCCTGGG AAAGCTGAGA AAAGAGATGG CAGGTTAGCA AACAGCTCTC
  Y
  CATAGGCTTC GAAGAAATGG CTCCCTAAAC TCGCAGTTTA AAAACATCAG ACAGATAGCT
  AATTAGTGGA AATCTAAACA CATGTCAACC CCACCCATCC ATGATGTAAC TGCTTTCTTC
  TCTTTTTTTC TTCTAGCTTT GCCCAGCTCT TACACAGCTT CTGAGAATAA ACAACATTTT
  GTGTTTCATA TTATATAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46397313	mCV23565642	ABI	CRAMUS_MOUSE	f	SNP	C						T		T
ss50736508	NES14247191	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	C	T		C	T	T	T	T	T	C	C
ss136610241	ENSMUSSNP4010092	ENSEMBL	ENSEMBL_Sanger	f	SNP									T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30329832					SNP	C	T	T	T	C	T	T	C	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50736508	NES14247191	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70872566 () rs orientation: forward

Symbol	Name	Function Class
Gm32074	predicted gene, 32074	1654 bp downstream
Rr682461	regulatory region 682461	1438 bp distal
Rr682462	regulatory region 682462	within coordinates
Rr682463	regulatory region 682463	908 bp proximal