rs30334937 SNP Detail

Summary

• ID
  rs30334937
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:58473475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAGATACT TGTATCCTGC
  ATTTCTGCTG TCTCTTGCTC TCACACTCAC CCCTATCCTG GCAATGGTCC TCATTTACTT
  TCCTGGTTTC CATAGTTTCT AAAGGTTACT TAATTACCTG ATGATGTGGA GCTAGGAGCC
  TCCAAGAAGA GAGAACATGT GACATTAAGA CAAGCACTAT TTTCCATATA TTATGACAAA
  Y
  ATTTAATTCT GAAGATTACC ATGTTGATAT TCTGTTTGGG AATTCCTGTT TAAGATTACA
  TACTGTCAAA AACAAGGTCT CAAGTGGTAT CATATATCAC CAGGTCCAGA AATTTTCGTT
  TCACTCAAGT CTTCCTTTTT GTGCTTATGT AAGCTACTTA GTCTGCTTGC CAGGATCATT
  TTATCATTGA ATTGATTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47935784	NES11634411	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30334937					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47935784	NES11634411	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:58473475 () rs orientation: forward

Symbol	Name	Function Class
Gm35077	predicted gene, 35077	1466 bp downstream
Vmn1r-ps22	vomeronasal 1 receptor, pseudogene 22	1243 bp upstream