rs30334943 SNP Detail

Summary

• ID
  rs30334943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:58474221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATATTCTCT TTGCAGAAAA
  GCTTTGAGAT TAATGCTTCA CATCTGGAAT ATTGGTTAAG AACAATTTTA ACTCTTGCAA
  AGGAGTATGG TTAGATTCCC AGCAATGACA TGATGGCTCA TGGCCAATTG TGACTCTAGA
  TTGGGGCAAT CCGTTGCCTG TGACACAGAA TGTTGGTAGT ACAAATAAAT GTAAGCAAGC
  R
  AAAGAGTCGC ATATGTAAAA TAAAATAAAT GAATCTTAAA TAAAAAACTC CAGAATGATA
  CCTAAGCACT GCTCTCCAAA TTGAAAGAAC AATAGCCATA TACCAATTTT AAAATTGCAA
  ATGCACAGAA ATATATGGAT AATGATTTTT AATTAGTTTT ACCTCTAAAA TATATTAATA
  TAACACATTT AATATGAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47935790	NES11634272	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G	G	G	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30334943					SNP	G	G	A	G	G	G	G	G	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47935790	NES11634272	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:58474221 () rs orientation: forward

Symbol	Name	Function Class
Gm35077	predicted gene, 35077	720 bp downstream
Vmn1r-ps22	vomeronasal 1 receptor, pseudogene 22	1989 bp upstream